News

CRISPRi Screen Discovers Mitochondrial Distress Signal

The function of mitochondria, the “powerhouse of the cell,” can be compromised in aging and disease. Dysfunctional mitochondria trigger a global cellular stress response, but how human mitochondria signal stress to the rest of the cell was unknown.

In a project led by postdoc Xiaoyan Guo in the Kampmann lab, a CRISPRi-based genetic screen uncovered the molecular mechanism by which mitochondrial dysfunction is relayed to the rest of the cell. The mitochondrial protease OMA1 cleaves a previously little characterized protein, DELE1. Cleaved DELE1 activates the kinase, HRI, triggering the so-called integrated stress response.

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Spreading of tau aggregates between cells is thought to be an important mechanism by which Alzheimer’s disease and several other neurodegenerative diseases progress. A major question is which cellular pathways mediate or counteract this process.

In a project led by postdoc John Chen in the Kampmann lab, a CRISPR-based genetic screen revealed an important role for the ESCRT pathway to prevent the escape of internalized tau aggregates from the endolysosomal pathway into the cytosol, where they can seed more tau aggregation. Collaborators included the Gestwicki and Southworth labs at the IND, the Grinberg lab at UCSF, and the Leonetti lab at the Chan Zuckerberg Biohub.

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By Jason Alvarez (UCSF News)

A team of scientists at UC San Francisco and the National Institutes of Health have achieved another CRISPR first, one which may fundamentally alter the way scientists study brain diseases.

In a paper published Aug. 15 in the journal Neuron, the researchers describe a technique that uses a special version of CRISPR developed at UCSF to systematically alter the activity of genes in human neurons generated from stem cells, the first successful merger of stem cell-derived cell types and CRISPR screening technologies.

Though mutations and other genetic variants are known to be associated with an increased risk for many neurological diseases, technological bottlenecks have thwarted the efforts of scientists working to understand exactly how these genes cause disease. 

“Prior to this study, there were significant limitations that... Read more ...

Self-Propagating Amyloid and Tau Prions found in Post-Mortem Brain Samples, With Highest Levels in Patients Who Died Young

By Nicholas Weiler (UCSF News)


Two proteins central to the pathology of Alzheimer’s disease act as prions — misshapen proteins that spread through tissue like an infection by forcing normal proteins to adopt the same misfolded shape — according to new UC San Francisco research.

Using novel laboratory tests, the researchers were able to detect and measure specific, self-propagating prion forms of the proteins amyloid beta (Aß) and tau in postmortem brain tissue of 75 Alzheimer’s patients. In a striking finding, higher levels of these prions in human brain samples were strongly associated with early-onset forms of the disease and younger age at death.

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